Image processing and analysis workstations

Image processing workstations

CELLIM provides dedicated computer resources for microscopy image processing, bioimage analysis, image visualisation and quantitative analysis of large multidimensional datasets. The main system is Odeon, a remote-access image processing server. Galibier is available as a local image analysis workstation and backup option when Odeon is fully booked.

CELLIM is part of the Euro-BioImaging network, which makes CELLIM imaging and bioimage analysis services accessible to users from around the world. Thanks to this open-access infrastructure and Odeon's remote access, international users can use CELLIM image processing resources without needing to be physically present at CEITEC.

Choose a resource
Odeon	Galibier	Software
Main remote-access Windows Server 2019 image processing server for large microscopy datasets, high-throughput bioimage analysis, Imaris 11, ZEN, CellProfiler, Fiji/ImageJ, Leica LAS X, LIGHTNING deconvolution and FLIM-related analysis.	Local CELLIM image processing workstation for interactive microscopy image analysis, data inspection, method development and backup processing when Odeon is fully booked.	Overview of commercial and open-source software available on CELLIM image processing systems, including Imaris, ZEN, CellProfiler, Fiji/ImageJ, LAS X, CellSens and Cellpose.
Open Odeon page	Open Galibier page	Open Software page

Which system should I use?

Booking system  |  CELLIM contact form  |  Euro-BioImaging